<<< ebuild_homepage_bad_statuscode >>> 7|000|2022-11-16|sci-biology/barrnap|barrnap-0.9.ebuild|https://vicbioinformatics.com/software.barrnap.shtml|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org 7|403|2021-12-17|sci-biology/KaKs_Calculator|KaKs_Calculator-2.0.ebuild|https://www.sciencedirect.com/science/article/pii/S1672022910600083|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org 7|404|2022-05-03|sci-biology/ncbi-blast+|ncbi-blast+-2.2.31.ebuild|https://ncbi.github.io/cxx-toolkit/t|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org 7|000|2021-12-17|sci-biology/pairagon|pairagon-1.1.ebuild|https://mblab.wustl.edu/software.html|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org 7|000|2022-11-16|sci-biology/prokka|prokka-1.14.6.ebuild|https://vicbioinformatics.com/software.prokka.shtml|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org 8|403|2023-01-13|sci-biology/SPAdes|SPAdes-3.15.3.ebuild|https://cab.spbu.ru/software/spades|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org 7|000|2022-11-16|sci-biology/VelvetOptimiser|VelvetOptimiser-2.2.6.ebuild|https://vicbioinformatics.com/software.velvetoptimiser.shtml|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org <<< ebuild_homepage_redirections >>> 8|200|2023-01-14|dev-python/py2bit|py2bit-0.3.0.ebuild|https://github.com/dpryan79/py2bit|https://github.com/deeptools/py2bit|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org 8|200|2023-01-14|dev-python/py2bit|py2bit-0.3.1.ebuild|https://github.com/dpryan79/py2bit|https://github.com/deeptools/py2bit|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org 8|200|2023-01-14|dev-python/py2bit|py2bit-9999.ebuild|https://github.com/dpryan79/py2bit|https://github.com/deeptools/py2bit|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org 8|200|2023-01-14|dev-python/pyBigWig|pyBigWig-0.3.17.ebuild|https://github.com/dpryan79/pyBigWig|https://github.com/deeptools/pyBigWig|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org 8|200|2023-01-14|dev-python/pyBigWig|pyBigWig-0.3.18.ebuild|https://github.com/dpryan79/pyBigWig|https://github.com/deeptools/pyBigWig|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org 8|200|2023-01-14|dev-python/pyBigWig|pyBigWig-9999.ebuild|https://github.com/dpryan79/pyBigWig|https://github.com/deeptools/pyBigWig|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org 7|200|2022-11-16|sci-biology/angsd|angsd-0.933.ebuild|http://www.popgen.dk/angsd|http://www.popgen.dk/angsd/index.php/Main_Page|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org 8|200|2022-01-27|sci-biology/bambus|bambus-2.33-r2.ebuild|https://sourceforge.net/apps/mediawiki/amos/index.php?title=AMOS|https://sourceforge.net/projects/amos/|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org 7|200|2022-11-16|sci-biology/BRAKER|BRAKER-2.1.2.ebuild|http://bioinf.uni-greifswald.de/augustus/downloads|http://bioinf.uni-greifswald.de/augustus/downloads/|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org 7|200|2022-11-16|sci-biology/BRAKER|BRAKER-2.1.2.ebuild|http://bioinf.uni-greifswald.de/bioinf/braker|http://bioinf.uni-greifswald.de/bioinf/braker/|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org 7|200|2022-11-16|sci-biology/diamond|diamond-2.0.6.ebuild|http://ab.inf.uni-tuebingen.de/software/diamond|https://www.wsi.uni-tuebingen.de/lehrstuehle/algorithms-in-bioinformatics/software/diamond/|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org 8|200|2023-01-14|sci-biology/gemini|gemini-0.30.2.ebuild|http://gemini.readthedocs.org/en/latest|https://gemini.readthedocs.io/en/latest/|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org 7|200|2022-01-15|sci-biology/jellyfish|jellyfish-1.1.12.ebuild|http://www.cbcb.umd.edu/software/jellyfish|http://www.cbcb.umd.edu/software/jellyfish/|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org 7|200|2021-12-17|sci-biology/KaKs_Calculator|KaKs_Calculator-1.2.ebuild|https://bigd.big.ac.cn/tools/kaks|https://ngdc.cncb.ac.cn/tools/kaks|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org 8|200|2021-08-03|sci-biology/MuSeqBox|MuSeqBox-5.7.2021.ebuild|http://brendelgroup.org/bioinformatics2go/MuSeqBox.php|https://brendelgroup.org/bioinformatics2go/MuSeqBox.php|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org 7|200|2022-11-16|sci-biology/nextclip|nextclip-1.3.1.ebuild|https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3928519|https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3928519/|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org 8|404|2022-01-26|sci-biology/subread|subread-2.0.3.ebuild|http://bioinf.wehi.edu.au/featureCounts/|https://bioinf.wehi.edu.au/featureCounts/|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org <<< ebuild_homepage_unsync >>> 2|sci-biology/jellyfish|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org 2|sci-biology/KaKs_Calculator|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org 2|sci-biology/kraken|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org 2|sci-biology/ncbi-blast+|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org <<< ebuild_leading_trailing_whitespaces_in_variables >>> 8|sci-biology/ncbi-vdb|ncbi-vdb-2.11.2.ebuild|DESCRIPTION|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org 8|sci-biology/ngs|ngs-2.11.2.ebuild|DESCRIPTION|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org <<< ebuild_multiple_deps_per_line >>> 8|sci-biology/deeptools|deeptools-3.5.0.ebuild|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org 8|sci-biology/deeptools|deeptools-3.5.1.ebuild|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org 7|sci-biology/megahit|megahit-1.2.9.ebuild|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org 7|sci-biology/prokka|prokka-1.14.6.ebuild|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org <<< ebuild_unused_patches >>> sci-biology/gffcompare|Makefile.patch|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org sci-biology/sra-tools|libs_sra_Makefile.patch|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org sci-biology/sra-tools|sra_sdk-destdir.patch|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org sci-biology/sra-tools|tools_vdb-vcopy_Makefile.patch|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org sci-libs/lib2bit|lib2bit-0.2.1_respect_DESTDIR.patch|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org <<< ebuild_unused_patches_simple >>> sci-biology/gffcompare|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org sci-biology/sra-tools|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org <<< packages_pkgcheck_scan >>> dev-python/gffpandas|DistutilsNonPEP517Build:PythonGHDistfileSuffix|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org dev-python/py2bit|RedirectedUrl|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org dev-python/pyBigWig|RedirectedUrl|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org sci-biology/angsd|RedirectedUrl|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org sci-biology/barrnap|DeadUrl|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org sci-biology/BRAKER|HttpsUrlAvailable:RedirectedUrl|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org sci-biology/deeptools|DistutilsNonPEP517Build:RedirectedUrl|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org sci-biology/diamond|HttpsUrlAvailable|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org sci-biology/gemini|DistutilsNonPEP517Build:HttpsUrlAvailable:RedirectedUrl|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org sci-biology/minimap2|DeadUrl:DistutilsNonPEP517Build:InvalidRemoteID|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org sci-biology/ncbi-vdb|UnquotedVariable|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org sci-biology/nextclip|RedirectedUrl|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org sci-biology/ngs|UnquotedVariable|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org sci-biology/phusion2|DeadUrl:ExcessiveLineLength:NonexistentDeps:RedirectedUrl|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org sci-biology/prokka|DeadUrl|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org sci-biology/SPAdes|RedirectedUrl|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org sci-biology/tigmint|DistutilsNonPEP517Build|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org sci-biology/trans-abyss|RequiredUseDefaults|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org sci-biology/VelvetOptimiser|DeadUrl|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org sci-libs/fast5|DistutilsNonPEP517Build:RequiredUseDefaults|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org