List generated on 2021-05-12
Packages affected: 294
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QTY     Package
     7  sci-biology-ncbi-blast+
     5  sci-mathematics-scilab
     5  sci-mathematics-netgen
     4  sci-mathematics-frama-c
     4  sci-libs-wannier90
     4  sci-libs-itk
     4  sci-biology-OBO-Edit
     4  sci-biology-ncbi-tools++
     4  sci-biology-jellyfish
     3  sci-mathematics-freefem++
     3  sci-mathematics-acl2
     3  sci-libs-pytorch
     3  sci-libs-lib2bit
     3  sci-libs-fox
     3  sci-libs-fgsl
     3  sci-chemistry-dl_poly
     3  sci-biology-Trinotate
     3  sci-biology-trinityrnaseq
     3  sci-biology-tabixpp
     3  sci-biology-sra_sdk
     3  sci-biology-SOAPdenovo2
     3  sci-biology-quorum
     3  sci-biology-KaKs_Calculator
     3  sci-biology-GAL
     3  sci-biology-estscan
     3  sci-biology-cluster
     3  sci-biology-caftools
     3  sci-biology-bowtie
     3  sci-biology-afni
     3  media-gfx-brlcad
     3  dev-util-boost-build
     3  dev-lang-vtune
     2  sci-physics-tauola
     2  sci-physics-opticks
     2  sci-physics-openmx
     2  sci-physics-fullprof-bin
     2  sci-misc-openfst
     2  sci-mathematics-open-axiom
     2  sci-mathematics-gap
     2  sci-mathematics-gappa
     2  sci-mathematics-flocq
     2  sci-mathematics-cipi
     2  sci-libs-zarja
     2  sci-libs-spyking-circus
     2  sci-libs-simpleitk
     2  sci-libs-rocBLAS
     2  sci-libs-rdkit
     2  sci-libs-pg2plplot
     2  sci-libs-nipy
     2  sci-libs-nibabel
     2  sci-libs-libflame-amd
     2  sci-libs-geom
     2  sci-libs-etsf_io
     2  sci-libs-cs-rosetta-db
     2  sci-libs-clrng
     2  sci-libs-asl
     2  sci-chemistry-module2
     2  sci-chemistry-ligplot+
     2  sci-chemistry-gamess
     2  sci-chemistry-concoord
     2  sci-biology-twinscan
     2  sci-biology-trf-bin
     2  sci-biology-symap
     2  sci-biology-subread
     2  sci-biology-staden
     2  sci-biology-stacks
     2  sci-biology-SPAdes
     2  sci-biology-salmon
     2  sci-biology-roche454ace2caf
     2  sci-biology-pufferfish
     2  sci-biology-prot4EST
     2  sci-biology-primerD
     2  sci-biology-pairagon
     2  sci-biology-oases
     2  sci-biology-NGSEPcore
     2  sci-biology-nextclip
     2  sci-biology-mreps
     2  sci-biology-MolBioLib
     2  sci-biology-merlin
     2  sci-biology-megahit
     2  sci-biology-manatee-jcvi
     2  sci-biology-manatee-igs
     2  sci-biology-maker
     2  sci-biology-lucy
     2  sci-biology-kraken
     2  sci-biology-jigsaw
     2  sci-biology-IMAGE
     2  sci-biology-glean
     2  sci-biology-gffcompare
     2  sci-biology-fsl
     2  sci-biology-diamond
     2  sci-biology-cortex_var
     2  sci-biology-bamql
     2  sci-biology-bambus
     2  sci-biology-arachne
     2  sci-biology-aghermann
     2  media-libs-imgui
     2  dev-util-f90cache
     2  dev-python-meshpy
     2  dev-perl-BTLib
     2  dev-lang-terra
     2  dev-java-skinlf
     2  dev-java-jogl
     2  dev-java-jlatexmath
     1  x11-libs-qwt
     1  sci-visualization-mricrogl
     1  sci-visualization-fsleyes
     1  sci-visualization-forge
     1  sci-physics-quinoa
     1  sci-misc-praat
     1  sci-mathematics-Oid
     1  sci-mathematics-libsfmt
     1  sci-mathematics-giac
     1  sci-libs-xblas
     1  sci-libs-vxl
     1  sci-libs-superlu_dist
     1  sci-libs-starparse
     1  sci-libs-spams-python
     1  sci-libs-scikits_video
     1  sci-libs-pydicom
     1  sci-libs-pybids
     1  sci-libs-pfft
     1  sci-libs-optpp
     1  sci-libs-nipype
     1  sci-libs-mlpack
     1  sci-libs-libStatGen
     1  sci-libs-jhdf5
     1  sci-libs-iRODS
     1  sci-libs-ipp
     1  sci-libs-htslib-plugins
     1  sci-libs-HDF5Plugin-Zstandard
     1  sci-libs-flexiblas
     1  sci-libs-fdlibm
     1  sci-libs-fast5
     1  sci-libs-ensmallen
     1  sci-libs-ccif
     1  sci-libs-blis-amd
     1  sci-libs-bids-validator
     1  sci-libs-arrayfire
     1  sci-libs-aocl-sparse
     1  sci-libs-aocl-libm
     1  sci-libs-amber99sb_phipsi
     1  sci-libs-amber99sbnmr
     1  sci-libs-amber99sbnmr-ildn
     1  sci-chemistry-rosetta-tools
     1  sci-chemistry-pyquante
     1  sci-chemistry-pymol-plugins-psico
     1  sci-chemistry-panav
     1  sci-chemistry-pales-bin
     1  sci-chemistry-nmrview
     1  sci-chemistry-nmrpipe
     1  sci-chemistry-MotionCor2
     1  sci-chemistry-mics
     1  sci-chemistry-mage
     1  sci-chemistry-freeon
     1  sci-biology-wgs_tools
     1  sci-biology-wcd
     1  sci-biology-verifyBamID
     1  sci-biology-vcflib
     1  sci-biology-VarScan-bin
     1  sci-biology-vague-bin
     1  sci-biology-ugene
     1  sci-biology-trim_galore
     1  sci-biology-TransDecoder
     1  sci-biology-trans-abyss
     1  sci-biology-tmhmm
     1  sci-biology-tigr-foundation-libs
     1  sci-biology-tigmint
     1  sci-biology-tagdust
     1  sci-biology-swissknife
     1  sci-biology-stringtie
     1  sci-biology-staden_doc
     1  sci-biology-spm
     1  sci-biology-SolexaQA
     1  sci-biology-snpomatic
     1  sci-biology-SnpEff
     1  sci-biology-snap
     1  sci-biology-smalt
     1  sci-biology-skewer-bin
     1  sci-biology-signalp
     1  sci-biology-sickle
     1  sci-biology-sff_dump
     1  sci-biology-seqtools
     1  sci-biology-scythe
     1  sci-biology-screed
     1  sci-biology-samstat
     1  sci-biology-sambamba
     1  sci-biology-sailfish
     1  sci-biology-RSeQC
     1  sci-biology-rnaplex
     1  sci-biology-pysamstats
     1  sci-biology-pyfaidx
     1  sci-biology-pybedtools
     1  sci-biology-prokka
     1  sci-biology-prinseq-lite
     1  sci-biology-portrait
     1  sci-biology-polyphen
     1  sci-biology-pileup
     1  sci-biology-phusion2
     1  sci-biology-perga
     1  sci-biology-parafly
     1  sci-biology-ParaAT
     1  sci-biology-opfvta_bidsdata
     1  sci-biology-open-ephys-gui
     1  sci-biology-NGSEPcore-bin
     1  sci-biology-MuSeqBox
     1  sci-biology-msautil
     1  sci-biology-mrsfast
     1  sci-biology-mouse-brain-templates
     1  sci-biology-mouse-brain-atlases
     1  sci-biology-MochiView
     1  sci-biology-mip-scaffolder
     1  sci-biology-mgblast
     1  sci-biology-MeV
     1  sci-biology-MaSuRCA
     1  sci-biology-lumpy-sv
     1  sci-biology-lighter
     1  sci-biology-libblasr
     1  sci-biology-last
     1  sci-biology-KING
     1  sci-biology-kat
     1  sci-biology-karect
     1  sci-biology-jtreeview
     1  sci-biology-jtreeview-bin
     1  sci-biology-hisat2
     1  sci-biology-hexamer
     1  sci-biology-graf-bin
     1  sci-biology-gffread
     1  sci-biology-germline
     1  sci-biology-genomeview-bin
     1  sci-biology-gemini
     1  sci-biology-fsa
     1  sci-biology-freebayes
     1  sci-biology-flexbar
     1  sci-biology-FLASH
     1  sci-biology-fastqc
     1  sci-biology-exonerate-gff3
     1  sci-biology-erpin
     1  sci-biology-epga
     1  sci-biology-dipy
     1  sci-biology-deeptools
     1  sci-biology-dcmstack
     1  sci-biology-dargcc_bidsdata
     1  sci-biology-cross_genome
     1  sci-biology-cramtools
     1  sci-biology-coral
     1  sci-biology-conrad
     1  sci-biology-cnrun
     1  sci-biology-clview
     1  sci-biology-cgview-bin
     1  sci-biology-cg-cat
     1  sci-biology-CAT
     1  sci-biology-cast-bin
     1  sci-biology-BRAKER
     1  sci-biology-blasr
     1  sci-biology-bismark
     1  sci-biology-biobambam2
     1  sci-biology-bedops
     1  sci-biology-BBmap
     1  sci-biology-ants
     1  sci-biology-angsd
     1  sci-biology-AlignGraph
     1  sci-biology-abacas
     1  sci-astronomy-erfa
     1  dev-util-rocm-clang-ocl
     1  dev-python-xopen
     1  dev-python-sphinx-automodapi
     1  dev-python-sphinx-astropy
     1  dev-python-sphinx-argparse
     1  dev-python-reproject
     1  dev-python-pyvote
     1  dev-python-pytest-doctestplus
     1  dev-python-pyBigWig
     1  dev-python-py2bit
     1  dev-python-numba
     1  dev-python-bokeh
     1  dev-python-bcbio-gff
     1  dev-python-astropy-healpix
     1  dev-python-asdf
     1  dev-python-arrayfire-python
     1  dev-perl-Bio-EnsEMBL
     1  dev-libs-simclist
     1  dev-libs-intel-common
     1  dev-libs-half
     1  dev-lang-pgi
     1  dev-lang-ifc
     1  dev-lang-icc
     1  dev-java-jlatexmath-fop
     1  dev-java-jeuclid-core
     1  dev-java-htsjdk
     1  dev-java-flexdock
     1  dev-java-fits
     1  app-text-noweb
     1  app-office-visidata