List generated on 2018-10-21
Packages affected: 1185
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QTY     Package
     7  sys-devel-gdebugger
     7  sci-libs-cblas-reference
     7  sci-biology-imagej
     6  sci-misc-foma
     6  sci-mathematics-petsc
     6  sci-mathematics-netgen
     6  sci-mathematics-Macaulay2
     6  sci-chemistry-nmrpipe
     6  sci-chemistry-modeller
     6  sci-biology-SOAPdenovo2
     5  sys-cluster-openmpi
     5  sys-cluster-lustre
     5  sci-physics-vgm
     5  sci-physics-abinit
     5  sci-misc-sfst
     5  sci-misc-elmer-fem
     5  sci-mathematics-ufc
     5  sci-libs-tensorflow
     5  sci-libs-openblas
     5  sci-libs-modglue
     5  sci-libs-dealii
     5  sci-biology-wcd
     5  sci-biology-reapr
     5  sci-biology-KaKs_Calculator
     5  sci-biology-fsl
     5  sci-biology-conrad
     5  sci-biology-blat
     5  sci-biology-bedops
     5  sci-biology-amos
     5  net-ftp-bbftp-server
     5  dev-libs-fortrancl
     5  dev-libs-asmjit
     4  x11-libs-tr
     4  sys-cluster-mpich2
     4  sys-cluster-htcondor
     4  sci-visualization-v_sim
     4  sci-physics-geant-vmc
     4  sci-misc-omorfi
     4  sci-misc-kotus-sanalista
     4  sci-misc-elmer-front
     4  sci-mathematics-slepc
     4  sci-mathematics-scilab
     4  sci-libs-spglib
     4  sci-libs-med
     4  sci-libs-lib2bit
     4  sci-libs-k3match
     4  sci-libs-gmsh
     4  sci-libs-fdlibm
     4  sci-libs-elmer-hutiter
     4  sci-libs-elmer-eio
     4  sci-libs-blas-reference
     4  sci-libs-arrayfire
     4  sci-chemistry-usf-tools
     4  sci-chemistry-shiftx2
     4  sci-chemistry-mgltools-opengltk
     4  sci-chemistry-mddnmr
     4  sci-chemistry-gnome-chemistry-utils
     4  sci-chemistry-gamess
     4  sci-chemistry-chooch
     4  sci-chemistry-chimera-bin
     4  sci-chemistry-camshift
     4  sci-biology-tigr-foundation-libs
     4  sci-biology-tablet
     4  sci-biology-tablet-bin
     4  sci-biology-staden
     4  sci-biology-scaffold_builder
     4  sci-biology-reptile
     4  sci-biology-Rcorrector
     4  sci-biology-picard
     4  sci-biology-OBO-Edit
     4  sci-biology-megahit
     4  sci-biology-jellyfish
     4  sci-biology-hydra-sv
     4  sci-biology-gmap
     4  sci-biology-germline
     4  sci-biology-gatk
     4  sci-biology-Gambit
     4  sci-biology-est2assembly
     4  sci-biology-cluster
     4  sci-biology-cgview-bin
     4  sci-biology-caftools
     4  sci-biology-ampliconnoise
     4  sci-astronomy-zebra
     4  dev-util-VampirTrace
     4  dev-util-nvidia-cuda-gdk
     4  dev-lua-lua-md5
     4  dev-java-hdf-java
     4  dev-cpp-eigen
     4  app-admin-eselect
     3  sys-cluster-mvapich2
     3  sys-cluster-mpe2
     3  sys-cluster-modules
     3  sci-visualization-mricrogl
     3  sci-physics-tauola
     3  sci-physics-genfit
     3  sci-physics-bigdft
     3  sci-physics-atompaw
     3  sci-misc-jwnl
     3  sci-misc-finomaton
     3  sci-misc-elmer-post
     3  sci-misc-elmer-gui
     3  sci-misc-elmer-elmergrid
     3  sci-mathematics-tisean
     3  sci-mathematics-pff
     3  sci-mathematics-kayali
     3  sci-mathematics-dolfin
     3  sci-mathematics-cadabra
     3  sci-mathematics-axiom
     3  sci-mathematics-aribas
     3  sci-mathematics-alt-ergo
     3  sci-libs-xblas
     3  sci-libs-wannier90
     3  sci-libs-trilinos
     3  sci-libs-starparse
     3  sci-libs-openlibm
     3  sci-libs-omalloc
     3  sci-libs-matc
     3  sci-libs-lwpr
     3  sci-libs-libspatialindex
     3  sci-libs-libgeodecomp
     3  sci-libs-lapack-reference
     3  sci-libs-itk
     3  sci-libs-iml
     3  sci-libs-fgsl
     3  sci-libs-factory
     3  sci-libs-dcmtk
     3  sci-libs-Cgraph
     3  sci-libs-cgnstools
     3  sci-libs-calculix-cgx
     3  sci-libs-calculix-ccx
     3  sci-libs-bigdft-abi
     3  sci-libs-atlas
     3  sci-libs-amber99sb_phipsi
     3  sci-libs-amber99sbnmr
     3  sci-libs-amber99sbnmr-ildn
     3  sci-geosciences-qgis
     3  sci-electronics-tnt
     3  sci-chemistry-wxmacmolplt
     3  sci-chemistry-trajng
     3  sci-chemistry-smmp
     3  sci-chemistry-rosetta
     3  sci-chemistry-pymol
     3  sci-chemistry-panav
     3  sci-chemistry-nMOLDYN
     3  sci-chemistry-modelfree
     3  sci-chemistry-mgltools-utpackages
     3  sci-chemistry-mgltools-geomutils
     3  sci-chemistry-freeon
     3  sci-chemistry-erkale
     3  sci-chemistry-dl_poly
     3  sci-chemistry-curvefit
     3  sci-chemistry-cpmgfit
     3  sci-chemistry-burrow-owl
     3  sci-biology-wise
     3  sci-biology-ugene
     3  sci-biology-trim_galore
     3  sci-biology-trf-bin
     3  sci-biology-STAR
     3  sci-biology-SPAdes
     3  sci-biology-SolexaQA
     3  sci-biology-skewer-bin
     3  sci-biology-seq_crumbs
     3  sci-biology-RADtools
     3  sci-biology-quorum
     3  sci-biology-psychopy
     3  sci-biology-proda
     3  sci-biology-plinkseq
     3  sci-biology-phusion
     3  sci-biology-ORFcor
     3  sci-biology-nextclip
     3  sci-biology-ncbi-tools++
     3  sci-biology-ncbi-blast+
     3  sci-biology-mavid
     3  sci-biology-MagicViewer
     3  sci-biology-kraken
     3  sci-biology-KING
     3  sci-biology-jannovar-bin
     3  sci-biology-IMAGE
     3  sci-biology-igv
     3  sci-biology-idba
     3  sci-biology-graf-bin
     3  sci-biology-gbench
     3  sci-biology-fgap
     3  sci-biology-estscan
     3  sci-biology-ESTate
     3  sci-biology-ensembl-tools
     3  sci-biology-EBARDenovo
     3  sci-biology-deeptools
     3  sci-biology-clover
     3  sci-biology-cegma
     3  sci-biology-cd-hit
     3  sci-biology-cd-hit-auxtools
     3  sci-biology-BRAKER
     3  sci-biology-blue
     3  sci-biology-biopieces
     3  sci-biology-bambus
     3  sci-biology-bambino
     3  sci-biology-augustus
     3  sci-biology-argo
     3  sci-biology-argo-bin
     3  sci-astronomy-starlink-bin
     3  sci-astronomy-casapy-bin
     3  sci-astronomy-bpz
     3  net-ftp-bbftp-client
     3  dev-util-bazel
     3  dev-util-amdapp
     3  dev-python-PyVISA
     3  dev-python-pynomo
     3  dev-python-opal-client
     3  dev-python-meshpy
     3  dev-python-Forthon
     3  dev-python-astropy
     3  dev-python-astropysics
     3  dev-perl-Lab-VISA
     3  dev-libs-simclist
     3  dev-libs-mxml
     3  dev-libs-libunzip
     3  dev-libs-libgdev
     3  dev-libs-libcuda
     3  dev-lang-pgi
     3  dev-java-netcdf
     3  dev-java-jogl
     3  dev-java-jlatexmath-fop
     3  dev-java-jgraphx
     3  dev-cpp-growler-arch
     3  app-portage-g-octave
     3  app-benchmarks-numbench
     2  x11-misc-envytools
     2  x11-libs-xview
     2  x11-libs-x
     2  virtual-perl-encoding-warnings
     2  virtual-geant
     2  virtual-g
     2  sys-cluster-
     2  sys-cluster-ope
     2  sys-cluster-mvap
     2  sys-cluster-mpich
     2  sys-cluster-mp
     2  sys-cluster-m
     2  sys-cluster-mod
     2  sys-cluster-htco
     2  sys-cluster-hpl
     2  sys-cluster-empi
     2  sys-cluster-
     2  sys-cluster-blcr
     2  sci-visualizatio
     2  sci-visualization-v
     2  sci-visualization-surf-ice
     2  sci-visualization-nod
     2  sci-visualization-mricron
     2  sci-visualization-f
     2  sci-physics
     2  sci-physics-ta
     2  sci-physics-
     2  sci-physics-quinoa
     2  sci-physics
     2  sci-physics-openmx
     2  sci-physics-op
     2  sci-physics-mc-te
     2  sci-physics-ge
     2  sci-physics-geant
     2  sci-physics-fullprof-bin
     2  sci-physics-fullprof
     2  sci-physics
     2  sci-physics-bi
     2  sci-physics-ato
     2  sci-physics-ab
     2  sci-misc-stanford-tagger
     2  sci-misc-stanford-ta
     2  sci-misc-stanford-pa
     2  sci-misc-simx
     2  sci-misc-
     2  sci-misc-
     2  sci-misc-pywor
     2  sci-misc-opennlp-maxent
     2  sci-misc-opennlp-ma
     2  sci-misc-openfst
     2  sci-misc-ope
     2  sci-misc-om
     2  sci-misc-
     2  sci-misc-m
     2  sci-misc-kotus-sanal
     2  sci-misc-
     2  sci-misc-hfst
     2  sci-misc-
     2  sci-misc-finom
     2  sci-misc-elmer-
     2  sci-misc-elmer-
     2  sci-misc-elmer-meshgen2d
     2  sci-misc-elmer-meshg
     2  sci-misc-elmer
     2  sci-misc-elmer-f
     2  sci-misc-elmer
     2  sci-misc-elmer-elmer
     2  sci-mathematics-z3
     2  sci-mathematic
     2  sci-mathematics-yo
     2  sci-mathematics-why3
     2  sci-mathematics-
     2  sci-mathematics
     2  sci-mathematics
     2  sci-mathematics-ti
     2  sci-mathematics-s
     2  sci-mathematics-sc
     2  sci-mathematics-pulp
     2  sci-mathematics-
     2  sci-mathematics
     2  sci-mathematics-p
     2  sci-mathematics-open-a
     2  sci-mathematics-Oid
     2  sci-mathematics
     2  sci-mathematics-ne
     2  sci-mathematics-mdp
     2  sci-mathematics
     2  sci-mathematics-Macau
     2  sci-mathematics-ltl2ba
     2  sci-mathematics-lt
     2  sci-mathematics
     2  sci-mathematics-lib
     2  sci-mathematics-lattE-macchiato
     2  sci-mathematics-lattE-macch
     2  sci-mathematics-ka
     2  sci-mathematics-kash
     2  sci-mathematics-htk
     2  sci-mathematics
     2  sci-mathematics-giac
     2  sci-mathematics-
     2  sci-mathematics-gap
     2  sci-mathematics-gappalib
     2  sci-mathematics-g
     2  sci-mathematics
     2  sci-mathematics-gambit
     2  sci-mathematics-ga
     2  sci-mathematics-freefem++
     2  sci-mathematics-freef
     2  sci-mathematics-fra
     2  sci-mathematics-f
     2  sci-mathematics-dsfmt
     2  sci-mathematics-d
     2  sci-mathematics-do
     2  sci-mathematics-cipi
     2  sci-mathematics-
     2  sci-mathematics-cad
     2  sci-mathematics-burrt
     2  sci-mathematics-a
     2  sci-mathematics-ar
     2  sci-mathematics-a
     2  sci-mathematics-alt-
     2  sci-mathematics-
     2  sci-libs-zarja
     2  sci-libs-z
     2  sci-libs-xraylib
     2  sci-libs-xra
     2  sci-libs-x
     2  sci-libs-wanni
     2  sci-libs
     2  sci-libs-tril
     2  sci-libs-tm
     2  sci-libs-tensor
     2  sci-libs-symmetrica
     2  sci-libs-symmet
     2  sci-libs-symengine
     2  sci-libs-symen
     2  sci-libs-superlu_
     2  sci-libs-starp
     2  sci-libs-sp
     2  sci-libs-scikits_image
     2  sci-libs-scikits_i
     2  sci-libs-scala
     2  sci-libs-r
     2  sci-libs-pydicom
     2  sci-libs-pybids
     2  sci-libs-pmx
     2  sci-libs-plasma
     2  sci-libs-pl
     2  sci-libs-pg2pl
     2  sci-libs-pfft
     2  sci-libs-
     2  sci-libs-parmetis
     2  sci-libs-parm
     2  sci-libs-optpp
     2  sci-libs-o
     2  sci-libs-open
     2  sci-libs-oma
     2  sci-libs-
     2  sci-libs-o2scl
     2  sci-libs-o
     2  sci-libs-ni-visa
     2  sci-libs-ni-
     2  sci-libs-nipy
     2  sci-libs-nexus
     2  sci-libs-n
     2  sci-libs-
     2  sci-libs-mpiblacs
     2  sci-libs-mpib
     2  sci-libs-mod
     2  sci-libs-ml
     2  sci-libs-mkl
     2  sci-libs-mesquite
     2  sci-libs-mesq
     2  sci-libs
     2  sci-libs-
     2  sci-libs-
     2  sci-libs-l
     2  sci-libs-lib
     2  sci-libs-libspatiali
     2  sci-libs-libmed
     2  sci-libs-libmatheval
     2  sci-libs-libmath
     2  sci-libs-libgeode
     2  sci-libs-libfac
     2  sci-libs-li
     2  sci-libs-libcg
     2  sci-libs-lapa
     2  sci-libs-lapacke-reference
     2  sci-libs-lapacke-refer
     2  sci-libs-k3m
     2  sci-libs-jhdf5
     2  sci-libs-j
     2  sci-libs
     2  sci-libs-i
     2  sci-libs-ipp
     2  sci-libs-io_lib
     2  sci-libs-io
     2  sci-libs
     2  sci-libs-htslib-plu
     2  sci-libs-gsl
     2  sci-libs
     2  sci-libs-gotoblas2
     2  sci-libs-gotob
     2  sci-libs-givaro
     2  sci-libs-gi
     2  sci-libs-ghmm
     2  sci-libs-
     2  sci-libs-geom
     2  sci-libs-
     2  sci-libs-frame
     2  sci-libs-fox
     2  sci-libs
     2  sci-libs-
     2  sci-libs-fd
     2  sci-libs-f
     2  sci-libs-fac
     2  sci-libs-ets
     2  sci-libs-elmer-hut
     2  sci-libs-elmer
     2  sci-libs-d
     2  sci-libs-cs-rosett
     2  sci-libs-clrng
     2  sci-libs-c
     2  sci-libs-clblas
     2  sci-libs-Cg
     2  sci-libs-cgnst
     2  sci-libs-ccif
     2  sci-libs-
     2  sci-libs-cblas-refer
     2  sci-libs-b
     2  sci-libs-blastdb
     2  sci-libs-bla
     2  sci-libs-bigdft
     2  sci-libs-a
     2  sci-libs-asl
     2  sci-libs
     2  sci-libs-amdlibm
     2  sci-libs-amd
     2  sci-libs-amber99sb_ph
     2  sci-libs-amber99sbnmr-
     2  sci-libs-amber99s
     2  sci-geosciences-
     2  sci-geosciences-pydap_responses
     2  sci-geosciences-pydap_responses
     2  sci-geosciences-pydap_responses_ne
     2  sci-geosciences-pydap_responses_ma
     2  sci-geosciences-pydap_responses
     2  sci-geosciences-pydap_handlers_sqlite
     2  sci-geosciences-pydap_handlers_sq
     2  sci-geosciences-pydap_handlers_proxy
     2  sci-geosciences-pydap_handlers_p
     2  sci-geosciences-pydap_handlers_ne
     2  sci-geosciences-pydap_handlers
     2  sci-geosciences-pydap_handlers_
     2  sci-geosciences-pydap_handlers_csv
     2  sci-geosciences-pydap_handlers
     2  sci-geosciences-p
     2  sci-electronics
     2  sci-electronics-s
     2  sci-electronics-pl
     2  sci-chemistry-usf-t
     2  sci-chemistry-
     2  sci-chemistry-tr
     2  sci-chemistry-ta
     2  sci-chemistry
     2  sci-chemistry-
     2  sci-chemistry-shi
     2  sci-chemistry-sh
     2  sci-chemistry-rosetta-tools
     2  sci-chemistry-rosetta-t
     2  sci-chemistry-ros
     2  sci-chemistry-pyqu
     2  sci-chemistry-pymol-plugins-psico
     2  sci-chemistry-pymol-plugins-p
     2  sci-chemistry-pymol-plugins-e
     2  sci-chemistry-p
     2  sci-chemistry-polygon
     2  sci-chemistry-pol
     2  sci-chemistry-phenix-bin
     2  sci-chemistry-pesto
     2  sci-chemistry-p
     2  sci-chemistry-p
     2  sci-chemistry-pales
     2  sci-chemistry-openbabel
     2  sci-chemistry-openbabel-ruby
     2  sci-chemistry-openbabel-
     2  sci-chemistry-openbabel-python
     2  sci-chemistry-openbabel-py
     2  sci-chemistry-openbabel-perl
     2  sci-chemistry-openbabel-
     2  sci-chemistry-openbabel-java
     2  sci-chemistry-openbabel-
     2  sci-chemistry-openb
     2  sci-chemistry-nw
     2  sci-chemistry-nmr
     2  sci-chemistry-nmr
     2  sci-chemistry-NMRdyn
     2  sci-chemistry-NM
     2  sci-chemistry-nMO
     2  sci-chemistry-mtz
     2  sci-chemistry-mtz
     2  sci-chemistry-module2
     2  sci-chemistry-mod
     2  sci-chemistry-model
     2  sci-chemistry-
     2  sci-chemistry-mgltools-webserv
     2  sci-chemistry-mgltools-vo
     2  sci-chemistry-mgltools-visio
     2  sci-chemistry-mgltools-vi
     2  sci-chemistry-mgltools-viewer-frame
     2  sci-chemistry-mgltools-utpack
     2  sci-chemistry-mgltools-sym
     2  sci-chemistry-mgltools-sup
     2  sci-chemistry-mgltools
     2  sci-chemistry-mgltools-scena
     2  sci-chemistry-mgltools-qsli
     2  sci-chemistry-mgltools-p
     2  sci-chemistry-mgltools-pyb
     2  sci-chemistry-mgltools-pyauto
     2  sci-chemistry-mgltools
     2  sci-chemistry-mgltools-networked
     2  sci-chemistry-mgltools-mo
     2  sci-chemistry-mgltools-mgl
     2  sci-chemistry-mgltools
     2  sci-chemistry-mgltools-geomu
     2  sci-chemistry-mgltools-de
     2  sci-chemistry-mgltools-cmo
     2  sci-chemistry-mgltools-
     2  sci-chemistry-mgltools-bh
     2  sci-chemistry-mgltools-autodockt
     2  sci-chemistry-mglt
     2  sci-chemistry-mdsctk
     2  sci-chemistry-md
     2  sci-chemistry-md
     2  sci-chemistry-mage
     2  sci-chemistry-
     2  sci-chemistry-ligplot+
     2  sci-chemistry-ligp
     2  sci-chemistry-jli
     2  sci-chemistry-jana
     2  sci-chemistry-hydr
     2  sci-chemistry-GromacsWrapper
     2  sci-chemistry-GromacsWra
     2  sci-chemistry-gnome-chemistry-u
     2  sci-chemistry-fr
     2  sci-chemistry-dssp2pdb
     2  sci-chemistry-dssp
     2  sci-chemistry-dra
     2  sci-chemistry-dl_
     2  sci-chemistry-curv
     2  sci-chemistry-cs-rosetta
     2  sci-chemistry-cs-ros
     2  sci-chemistry-cpm
     2  sci-chemistry-coot
     2  sci-chemistry-concoord
     2  sci-chemistry-conc
     2  sci-chemistry-cns
     2  sci-chemistry-ch
     2  sci-chemistry-cams
     2  sci-chemistry-burrow
     2  sci-chemistry-
     2  sci-chemistry-ambertools
     2  sci-chemistry-ambert
     2  sci-biology-zmsort
     2  sci-biology-zm
     2  sci-biology-zmap
     2  sci-biology-Y
     2  sci-biology-
     2  sci-biology-wgs_tools
     2  sci-biology-wgs_t
     2  sci-biology-wgs-assembler
     2  sci-biology-wgs-assem
     2  sci-biology-web
     2  sci-biology
     2  sci-biolog
     2  sci-biology-vel
     2  sci-biology-VarScan
     2  sci-biology-VarScan-bin
     2  sci-biology-VarScan
     2  sci-biology-Var
     2  sci-biology-vague
     2  sci-biology-u
     2  sci-biology-twinscan
     2  sci-biology-twin
     2  sci-biology-trowel
     2  sci-biology-tr
     2  sci-biology-Trino
     2  sci-biology-trinityrn
     2  sci-biology-trimmomatic
     2  sci-biology-trim_ga
     2  sci-biology-trans-abyss
     2  sci-biology-trans-a
     2  sci-biology-tigr-foundation-
     2  sci-biology-tig
     2  sci-biology-tclust
     2  sci-biology-tc
     2  sci-biology-tagdust
     2  sci-biology-tag
     2  sci-biology-ta
     2  sci-biology-s
     2  sci-biology-swissk
     2  sci-biology-sub
     2  sci-biology-stringtie
     2  sci-biology-
     2  sci-biology-stampy
     2  sci-biology-staden_doc
     2  sci-biology-staden
     2  sci-biology-st
     2  sci-biology-st
     2  sci-biology-SSAKE
     2  sci-biology-S
     2  sci-biology-ssaha2-bin
     2  sci-biology-ssaha2
     2  sci-biology-sra_sdk
     2  sci-biology-sra
     2  sci-biology-spm
     2  sci-biology
     2  sci-biology-SP
     2  sci-biology-somatic-sn
     2  sci-biology-Sole
     2  sci-biology-SOAPden
     2  sci-biology-snpom
     2  sci-biology-snphylo
     2  sci-biology-snp
     2  sci-biology-SnpEff
     2  sci-biology-Sn
     2  sci-biology-
     2  sci-biology-smalt
     2  sci-biology-smalt-bin
     2  sci-biology-smalt
     2  sci-biology-s
     2  sci-biology-skewer
     2  sci-biology-sig
     2  sci-biology-si
     2  sci-biology-
     2  sci-biology
     2  sci-biology-sff_
     2  sci-biology-se
     2  sci-biology-seqtools
     2  sci-biology-seq_cr
     2  sci-biology-seqclean
     2  sci-biology-seqc
     2  sci-biology-SEECER
     2  sci-biology-sc
     2  sci-biology-screed
     2  sci-biology-sc
     2  sci-biology-sclust
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