8|404|2025-12-19|dev-python/cffconvert|cffconvert-2.0.0.ebuild|https://github.com/citation-fiel-format/cffconvert/|apn-pucky@gentoo.org
8|404|2025-12-23|dev-python/linesep|linesep-0.5.0.ebuild|https://github.com/jwodder/linesepkat|gentoo@chymera.eu:sci@gentoo.org
8|404|2026-02-10|dev-python/numdifftools|numdifftools-0.9.41.ebuild|https://github.com/pbord/numdifftools|sci@gentoo.org:apn-pucky@gentoo.org
8|404|2026-02-10|dev-python/numdifftools|numdifftools-0.9.42.ebuild|https://github.com/pbord/numdifftools|sci@gentoo.org:apn-pucky@gentoo.org
8|404|2026-02-10|dev-python/pyerrors|pyerrors-2.14.0.ebuild|https://github.com/fjoswig/pyerrors|sci@gentoo.org:apn-pucky@gentoo.org
7|403|2023-07-04|sci-biology/AlignGraph|AlignGraph-9999.ebuild|http://bioinformatics.oxfordjournals.org/content/30/12/i319.long|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org
8|403|2025-12-20|sci-biology/dargcc_bidsdata|dargcc_bidsdata-1.0.ebuild|https://academic.oup.com/cercor/article/28/7/2495/4975475|gentoo@chymera.eu:sci@gentoo.org
8|000|2023-07-04|sci-biology/jellyfish|jellyfish-1.1.12.ebuild|https://genome.umd.edu/jellyfish.html|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org
8|000|2023-07-04|sci-biology/jellyfish|jellyfish-2.3.0.ebuild|https://genome.umd.edu/jellyfish.html|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org
7|403|2023-07-04|sci-biology/KaKs_Calculator|KaKs_Calculator-2.0.ebuild|https://www.sciencedirect.com/science/article/pii/S1672022910600083|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org
7|403|2023-07-04|sci-biology/karect|karect-1.0.ebuild|http://bioinformatics.oxfordjournals.org/content/31/21/3421.abstract|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org
8|403|2023-07-04|sci-biology/MaSuRCA|MaSuRCA-4.0.1.ebuild|http://bioinformatics.oxfordjournals.org/content/29/21/2669|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org
8|403|2023-07-04|sci-biology/MaSuRCA|MaSuRCA-4.1.0.ebuild|http://bioinformatics.oxfordjournals.org/content/29/21/2669|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org
8|403|2026-02-03|sci-biology/megahit|megahit-1.2.9.ebuild|http://bioinformatics.oxfordjournals.org/content/31/10/1674.abstract|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org
8|404|2025-08-15|sci-biology/MochiView|MochiView-1.46-r1.ebuild|https://www.johnsonlab.ucsf.edu/mochi.html|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org
7|308|2023-07-04|sci-biology/msautil|msautil-1.1-r1.ebuild|http://bioresearch.byu.edu/msa|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org
7|000|2023-07-04|sci-biology/pairagon|pairagon-1.1.ebuild|https://mblab.wustl.edu/software.html|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org
7|000|2023-07-04|sci-biology/ParaAT|ParaAT-1.0.ebuild|http://cbb.big.ac.cn/software|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org
7|403|2023-07-04|sci-biology/ParaAT|ParaAT-1.0.ebuild|https://www.sciencedirect.com/science/article/pii/S0006291X12003518|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org
8|000|2026-02-03|sci-biology/SPAdes|SPAdes-3.15.5.ebuild|https://cab.spbu.ru/software/spades|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org
7|000|2023-07-04|sci-biology/stringtie|stringtie-2.1.5.ebuild|https://ccb.jhu.edu/software/stringtie|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org
7|404|2023-07-04|sci-biology/tagdust|tagdust-20101028.ebuild|http://genome.gsc.riken.jp/osc/english/dataresource|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org
7|000|2023-07-04|sci-biology/twinscan|twinscan-4.1.2-r1.ebuild|https://mblab.wustl.edu/software.html|sci-biology@gentoo.org
8|000|2026-01-28|sci-biology/ugene|ugene-40.1-r1.ebuild|http://ugene.unipro.ru|alexxy@gentoo.org:sci@gentoo.org
8|000|2025-01-11|sci-biology/vague-bin|vague-bin-1.0.5.ebuild|https://vicbioinformatics.com/software.vague.shtml|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org
7|000|2024-05-23|sci-biology/VelvetOptimiser|VelvetOptimiser-2.2.6.ebuild|https://vicbioinformatics.com/software.velvetoptimiser.shtml|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org
7|303|2023-07-04|sci-biology/wgs_tools|wgs_tools-9999.ebuild|https://www.ncbi.nlm.nih.gov/genbank/wgs|mmokrejs@fold.natur.cuni.cz:sci-biology@gentoo.org
8|000|2025-12-20|sci-chemistry/mics|mics-1.00.2011.327.12.00-r1.ebuild|https://spin.niddk.nih.gov/bax/software/MICS/|sci-chemistry@gentoo.org
7|000|2025-12-20|sci-libs/cs-rosetta-db|cs-rosetta-db-2.01.2019.06.ebuild|https://spin.niddk.nih.gov/bax/software/CSROSETTA/|sci@gentoo.org
7|000|2023-07-04|sci-misc/irstlm|irstlm-6.00.05.ebuild|https://hlt-mt.fbk.eu/technologies/irstlm|pavel.a.denisov@gmail.com
8|000|2023-07-04|sci-misc/irstlm|irstlm-6.00.05-r1.ebuild|https://hlt-mt.fbk.eu/technologies/irstlm|pavel.a.denisov@gmail.com
8|404|2025-08-20|sci-physics/qcdloop|qcdloop-2.0.11.ebuild|https://qcdloop.web.cern.ch/qcdloop/|apn-pucky@gentoo.org:sci-physics@gentoo.org
8|404|2025-08-20|sci-physics/qcdloop|qcdloop-2.0.9.ebuild|https://qcdloop.web.cern.ch/qcdloop/|apn-pucky@gentoo.org:sci-physics@gentoo.org
8|000|2025-08-20|sci-physics/qgraf|qgraf-3.4.2.ebuild|http://cfif.ist.utl.pt/~paulo/qgraf.html|apn-pucky@gentoo.org:sci-physics@gentoo.org
8|000|2025-08-20|sci-physics/qgraf|qgraf-3.5.3.ebuild|http://cfif.ist.utl.pt/~paulo/qgraf.html|apn-pucky@gentoo.org:sci-physics@gentoo.org
8|000|2025-08-20|sci-physics/qgraf|qgraf-3.6.9.ebuild|http://cfif.ist.utl.pt/~paulo/qgraf.html|apn-pucky@gentoo.org:sci-physics@gentoo.org
8|000|2025-08-20|sci-physics/qgraf|qgraf-4.0.5.ebuild|http://cfif.ist.utl.pt/~paulo/qgraf.html|apn-pucky@gentoo.org:sci-physics@gentoo.org